STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112953648Histone H3.3. (136 aa)    
Predicted Functional Partners:
KDM6A
Lysine demethylase 6A.
   
 0.971
LOC112957730
Lysine-specific demethylase 6B-like.
   
 0.971
ARID4B
AT-rich interaction domain 4B.
   
 0.886
ARID4A
AT-rich interaction domain 4A.
   
 0.886
SETD1B
SET domain containing 1B, histone lysine methyltransferase.
   
 0.883
ENSNPEP00000010603
annotation not available
 
 
 0.883
DOT1L
DOT1 like histone lysine methyltransferase.
   
 0.882
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.878
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.876
MPHOSPH8
M-phase phosphoprotein 8.
    
 0.875
Your Current Organism:
Nothoprocta perdicaria
NCBI taxonomy Id: 30464
Other names: N. perdicaria
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.