STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IKIK cytokine. (553 aa)    
Predicted Functional Partners:
SMU1
SMU1 DNA replication regulator and spliceosomal factor.
   
 0.999
PRPF6
pre-mRNA processing factor 6.
   
 0.994
MFAP1
Microfibril associated protein 1.
   
  0.994
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
    
 0.993
PRPF38A
pre-mRNA processing factor 38A.
   
 0.984
PRPF3
pre-mRNA processing factor 3.
   
  0.980
PRPF8
pre-mRNA processing factor 8.
    
 0.979
LSM4
LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated.
    
 0.979
SF3B1
Splicing factor 3b subunit 1.
   
 0.978
SNRPD3
Small nuclear ribonucleoprotein D3 polypeptide.
    
 0.977
Your Current Organism:
Nothoprocta perdicaria
NCBI taxonomy Id: 30464
Other names: N. perdicaria
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.