STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEBPACCAAT enhancer binding protein alpha. (323 aa)    
Predicted Functional Partners:
CEBPB
CCAAT enhancer binding protein beta.
   
0.967
PDGFRA
Platelet derived growth factor receptor alpha.
     
 0.863
PER3
Period circadian regulator 3.
    
 0.856
PER2
Period circadian regulator 2.
    
 0.856
COX5A
Cytochrome c oxidase subunit 5A.
   
 0.854
CDK3
Cyclin dependent kinase 3.
    
 0.852
CUNH1orf198
Chromosome unknown C1orf198 homolog.
   
 0.851
CBFA2T3
CBFA2/RUNX1 partner transcriptional co-repressor 3.
    
 0.845
RUNX1T1
RUNX1 partner transcriptional co-repressor 1.
    
 0.845
ATF4
Activating transcription factor 4.
   
 0.842
Your Current Organism:
Nothoprocta perdicaria
NCBI taxonomy Id: 30464
Other names: N. perdicaria
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.