STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP1Interstitial collagenase-like. (471 aa)    
Predicted Functional Partners:
TIMP2
TIMP metallopeptidase inhibitor 2.
   
 0.895
TIMP3
TIMP metallopeptidase inhibitor 3.
   
 0.880
MMP9
Matrix metallopeptidase 9.
   
0.880
LOC112943717
Stromelysin-1-like.
  
 
0.773
LOC112943711
Stromelysin-1-like.
  
 
0.771
MMP2
Matrix metallopeptidase 2.
   
 
0.764
MMP7
Matrix metallopeptidase 7.
  
0.726
MMP15
Matrix metallopeptidase 15.
  
0.708
TIMP4
TIMP metallopeptidase inhibitor 4.
    
 0.698
MMP11
Matrix metallopeptidase 11.
  
0.697
Your Current Organism:
Nothoprocta perdicaria
NCBI taxonomy Id: 30464
Other names: N. perdicaria
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.