STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HHIPHedgehog interacting protein. (695 aa)    
Predicted Functional Partners:
SHH
Sonic hedgehog signaling molecule.
    
 0.966
DHH
Desert hedgehog signaling molecule.
    
 0.956
IHH
Indian hedgehog signaling molecule.
    
 0.955
ENSNPEP00000010231
annotation not available
    
 0.803
GAPDH
Glyceraldehyde-3-phosphate dehydrogenase.
     
 0.650
PTCH1
Patched 1.
    
 
 0.649
NCSTN
Nicastrin.
    
 0.619
ENSNPEP00000019318
annotation not available
    
 0.581
APBA2
Amyloid beta precursor protein binding family A member 2.
    
 
 0.580
APBA1
Amyloid beta precursor protein binding family A member 1.
    
 
 0.580
Your Current Organism:
Nothoprocta perdicaria
NCBI taxonomy Id: 30464
Other names: N. perdicaria
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.