STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPTSSASerine palmitoyltransferase small subunit A. (68 aa)    
Predicted Functional Partners:
ENSNPEP00000001882
annotation not available
    
 0.969
SPTLC1
Serine palmitoyltransferase long chain base subunit 1.
    
 0.969
ORMDL1
ORMDL sphingolipid biosynthesis regulator 1.
    
 0.960
ORMDL3
ORMDL sphingolipid biosynthesis regulator 3.
    
 0.960
SPTLC3
Serine palmitoyltransferase long chain base subunit 3.
    
 0.881
ENSNPEP00000014474
annotation not available
    
 0.881
SPTLC2
Serine palmitoyltransferase long chain base subunit 2.
    
 0.881
ENSNPEP00000015663
annotation not available
    
 0.832
ALAS1
5'-aminolevulinate synthase 1.
    
 0.659
GCAT
Glycine C-acetyltransferase.
    
 0.659
Your Current Organism:
Nothoprocta perdicaria
NCBI taxonomy Id: 30464
Other names: N. perdicaria
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.