STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNPEP00000008737annotation not available (101 aa)    
Predicted Functional Partners:
DDX39B
DExD-box helicase 39B.
   
 0.993
THOC3
THO complex 3.
    
 0.992
THOC1
THO complex 1.
   
 0.992
THOC5
THO complex 5.
   
 0.991
ALYREF
Aly/REF export factor.
   
 0.989
VIRMA
Vir like m6A methyltransferase associated.
   
 0.939
NCBP1
Nuclear cap binding protein subunit 1.
    
 0.932
ENSNPEP00000004497
annotation not available
   
 0.930
THOC7
THO complex 7.
   
 0.930
LOC112948677
Nuclear cap-binding protein subunit 2.
    
 0.918
Your Current Organism:
Nothoprocta perdicaria
NCBI taxonomy Id: 30464
Other names: N. perdicaria
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.