STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGAP1post-GPI attachment to proteins inositol deacylase 1. (835 aa)    
Predicted Functional Partners:
TMED10
Transmembrane p24 trafficking protein 10.
    
 
 0.970
PIGK
Phosphatidylinositol glycan anchor biosynthesis class K.
    
 0.932
PIGT
Phosphatidylinositol glycan anchor biosynthesis class T.
    
 0.931
PIGS
Phosphatidylinositol glycan anchor biosynthesis class S.
    
 0.924
PIGU
Phosphatidylinositol glycan anchor biosynthesis class U.
    
 0.918
PGAP3
post-GPI attachment to proteins phospholipase 3.
    
 
 0.665
PIGG
Phosphatidylinositol glycan anchor biosynthesis class G.
   
 
 0.626
PIGN
Phosphatidylinositol glycan anchor biosynthesis class N.
    
 
 0.586
PIGW
Phosphatidylinositol glycan anchor biosynthesis class W.
    
 
 0.573
PIGB
Phosphatidylinositol glycan anchor biosynthesis class B.
    
 
 0.571
Your Current Organism:
Nothoprocta perdicaria
NCBI taxonomy Id: 30464
Other names: N. perdicaria
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.