FAM49B protein (Nothoprocta perdicaria) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

FAM49B

Family with sequence similarity 49 member B. (324 aa)

Predicted Functional Partners:

TASP1

0.535

ENSNPEP00000006715

0.512

RAC1

0.419

RAC3

0.419

RAC2

0.419

Your Current Organism:

Nothoprocta perdicaria

NCBI taxonomy Id: 30464
Other names: N. perdicaria

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSNPEP00000006715	FAM49B	ENSNPEP00000006715	ENSNPEP00000009742	annotation not available	Family with sequence similarity 49 member B.	0.512
ENSNPEP00000006715	TASP1	ENSNPEP00000006715	ENSNPEP00000014482	annotation not available	Taspase 1.	0.509
FAM49B	ENSNPEP00000006715	ENSNPEP00000009742	ENSNPEP00000006715	Family with sequence similarity 49 member B.	annotation not available	0.512
FAM49B	RAC1	ENSNPEP00000009742	ENSNPEP00000005996	Family with sequence similarity 49 member B.	Rac family small GTPase 1.	0.419
FAM49B	RAC2	ENSNPEP00000009742	ENSNPEP00000016741	Family with sequence similarity 49 member B.	Rac family small GTPase 2.	0.419
FAM49B	RAC3	ENSNPEP00000009742	ENSNPEP00000013271	Family with sequence similarity 49 member B.	Rac family small GTPase 3.	0.419
FAM49B	TASP1	ENSNPEP00000009742	ENSNPEP00000014482	Family with sequence similarity 49 member B.	Taspase 1.	0.535
RAC1	FAM49B	ENSNPEP00000005996	ENSNPEP00000009742	Rac family small GTPase 1.	Family with sequence similarity 49 member B.	0.419
RAC1	RAC2	ENSNPEP00000005996	ENSNPEP00000016741	Rac family small GTPase 1.	Rac family small GTPase 2.	0.817
RAC2	FAM49B	ENSNPEP00000016741	ENSNPEP00000009742	Rac family small GTPase 2.	Family with sequence similarity 49 member B.	0.419
RAC2	RAC1	ENSNPEP00000016741	ENSNPEP00000005996	Rac family small GTPase 2.	Rac family small GTPase 1.	0.817
RAC2	RAC3	ENSNPEP00000016741	ENSNPEP00000013271	Rac family small GTPase 2.	Rac family small GTPase 3.	0.817
RAC3	FAM49B	ENSNPEP00000013271	ENSNPEP00000009742	Rac family small GTPase 3.	Family with sequence similarity 49 member B.	0.419
RAC3	RAC2	ENSNPEP00000013271	ENSNPEP00000016741	Rac family small GTPase 3.	Rac family small GTPase 2.	0.817
TASP1	ENSNPEP00000006715	ENSNPEP00000014482	ENSNPEP00000006715	Taspase 1.	annotation not available	0.509
TASP1	FAM49B	ENSNPEP00000014482	ENSNPEP00000009742	Taspase 1.	Family with sequence similarity 49 member B.	0.535