STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MGRN1Mahogunin ring finger 1. (522 aa)    
Predicted Functional Partners:
ATRN
Attractin.
   
 
 0.658
ENSNPEP00000019422
annotation not available
   
 
 0.658
ANKRD46
Ankyrin repeat domain 46.
    
   0.640
UBA3
Ubiquitin like modifier activating enzyme 3.
     
 0.608
TSG101
Tumor susceptibility 101.
    
 
 0.593
POLR3K
RNA polymerase III subunit K.
      
 0.529
POLR3E
RNA polymerase III subunit E.
      
 0.513
TEN1
TEN1 subunit of CST complex.
      
 0.439
LCMT1
Leucine carboxyl methyltransferase 1.
      
 0.431
NPRL3
NPR3 like, GATOR1 complex subunit.
      
 0.422
Your Current Organism:
Nothoprocta perdicaria
NCBI taxonomy Id: 30464
Other names: N. perdicaria
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.