STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMNB2Lamin B2. (608 aa)    
Predicted Functional Partners:
BANF1
Barrier to autointegration factor 2.
   
 0.873
CASP6
Caspase 6.
    
 0.870
LOC112952765
lamin-L(III)-like.
  
  
0.830
LOC112946802
Duodenase-1-like.
    
 0.797
LEMD3
LEM domain containing 3.
    
 0.770
SUN2
Sad1 and UNC84 domain containing 2.
    
 0.735
SUN1
Sad1 and UNC84 domain containing 1.
    
 0.718
TMPO
Thymopoietin.
   
 0.665
CASP3
Caspase 3.
   
 0.658
CASP7
Caspase 7.
   
 0.642
Your Current Organism:
Nothoprocta perdicaria
NCBI taxonomy Id: 30464
Other names: N. perdicaria
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.