Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CCK | STC1 | ENSNPEP00000003110 | ENSNPEP00000015469 | Cholecystokinin. | Stanniocalcin 1. | 0.502 |
LEMD3 | STC1 | ENSNPEP00000009823 | ENSNPEP00000015469 | LEM domain containing 3. | Stanniocalcin 1. | 0.469 |
RBM39 | STC1 | ENSNPEP00000005061 | ENSNPEP00000015469 | RNA binding motif protein 39. | Stanniocalcin 1. | 0.469 |
STC1 | CCK | ENSNPEP00000015469 | ENSNPEP00000003110 | Stanniocalcin 1. | Cholecystokinin. | 0.502 |
STC1 | LEMD3 | ENSNPEP00000015469 | ENSNPEP00000009823 | Stanniocalcin 1. | LEM domain containing 3. | 0.469 |
STC1 | RBM39 | ENSNPEP00000015469 | ENSNPEP00000005061 | Stanniocalcin 1. | RNA binding motif protein 39. | 0.469 |
STC1 | TNFAIP6 | ENSNPEP00000015469 | ENSNPEP00000020624 | Stanniocalcin 1. | TNF alpha induced protein 6. | 0.525 |
TNFAIP6 | STC1 | ENSNPEP00000020624 | ENSNPEP00000015469 | TNF alpha induced protein 6. | Stanniocalcin 1. | 0.525 |