Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGRN | DOK7 | ENSNPEP00000006635 | ENSNPEP00000002533 | Agrin. | Docking protein 7. | 0.582 |
AGRN | MUSK | ENSNPEP00000006635 | ENSNPEP00000015928 | Agrin. | Muscle associated receptor tyrosine kinase. | 0.720 |
BDNF | ENSNPEP00000017241 | ENSNPEP00000011600 | ENSNPEP00000017241 | Brain derived neurotrophic factor. | annotation not available | 0.877 |
BDNF | MET | ENSNPEP00000011600 | ENSNPEP00000019171 | Brain derived neurotrophic factor. | MET proto-oncogene, receptor tyrosine kinase. | 0.878 |
BDNF | MUSK | ENSNPEP00000011600 | ENSNPEP00000015928 | Brain derived neurotrophic factor. | Muscle associated receptor tyrosine kinase. | 0.756 |
BDNF | MYO9A | ENSNPEP00000011600 | ENSNPEP00000000188 | Brain derived neurotrophic factor. | Myosin IXA. | 0.556 |
BDNF | NTF3 | ENSNPEP00000011600 | ENSNPEP00000000757 | Brain derived neurotrophic factor. | Neurotrophin 3. | 0.963 |
CORIN | ENSNPEP00000002521 | ENSNPEP00000006078 | ENSNPEP00000002521 | Corin, serine peptidase. | annotation not available | 0.401 |
CORIN | ENSNPEP00000017241 | ENSNPEP00000006078 | ENSNPEP00000017241 | Corin, serine peptidase. | annotation not available | 0.896 |
CORIN | ITSN2 | ENSNPEP00000006078 | ENSNPEP00000011758 | Corin, serine peptidase. | Intersectin 2. | 0.704 |
CORIN | MET | ENSNPEP00000006078 | ENSNPEP00000019171 | Corin, serine peptidase. | MET proto-oncogene, receptor tyrosine kinase. | 0.896 |
CORIN | MUSK | ENSNPEP00000006078 | ENSNPEP00000015928 | Corin, serine peptidase. | Muscle associated receptor tyrosine kinase. | 0.795 |
DOK7 | AGRN | ENSNPEP00000002533 | ENSNPEP00000006635 | Docking protein 7. | Agrin. | 0.582 |
DOK7 | ENSNPEP00000017241 | ENSNPEP00000002533 | ENSNPEP00000017241 | Docking protein 7. | annotation not available | 0.400 |
DOK7 | MET | ENSNPEP00000002533 | ENSNPEP00000019171 | Docking protein 7. | MET proto-oncogene, receptor tyrosine kinase. | 0.400 |
DOK7 | MUSK | ENSNPEP00000002533 | ENSNPEP00000015928 | Docking protein 7. | Muscle associated receptor tyrosine kinase. | 0.959 |
ENSNPEP00000002521 | CORIN | ENSNPEP00000002521 | ENSNPEP00000006078 | annotation not available | Corin, serine peptidase. | 0.401 |
ENSNPEP00000002521 | ENSNPEP00000017241 | ENSNPEP00000002521 | ENSNPEP00000017241 | annotation not available | annotation not available | 0.948 |
ENSNPEP00000002521 | MET | ENSNPEP00000002521 | ENSNPEP00000019171 | annotation not available | MET proto-oncogene, receptor tyrosine kinase. | 0.952 |
ENSNPEP00000002521 | MUSK | ENSNPEP00000002521 | ENSNPEP00000015928 | annotation not available | Muscle associated receptor tyrosine kinase. | 0.715 |
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