STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAIPTRAF interacting protein. (425 aa)    
Predicted Functional Partners:
FANCD2
FA complementation group D2.
   
 
 0.630
LRR1
Leucine rich repeat protein 1.
   
 
 0.610
NEIL3
Nei like DNA glycosylase 3.
   
  
 0.550
MBLAC1
Metallo-beta-lactamase domain containing 1.
      
 0.510
CDC45
Cell division cycle 45.
   
  
 0.502
SPRTN
SprT-like N-terminal domain.
      
 0.493
TRAF2
TNF receptor associated factor 2.
    
 
 0.490
TRAF1
TNF receptor associated factor 1.
    
 
 0.490
GINS4
GINS complex subunit 4.
   
 
 0.465
UBA5
Ubiquitin like modifier activating enzyme 5.
     
 0.464
Your Current Organism:
Nothoprocta perdicaria
NCBI taxonomy Id: 30464
Other names: N. perdicaria
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.