STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPNE8Copine 8. (515 aa)    
Predicted Functional Partners:
RNASEH2B
Ribonuclease H2 subunit B.
   
 0.714
PIK3C3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.575
ENSNPEP00000011970
annotation not available
     
 0.555
PI4KA
Phosphatidylinositol 4-kinase alpha.
     
 0.547
PI4KB
Phosphatidylinositol 4-kinase beta.
     
 0.545
ENSNPEP00000002748
annotation not available
 
     0.464
VAMP3
Vesicle associated membrane protein 3.
   
 
 0.450
CAPZB
Capping actin protein of muscle Z-line subunit beta.
     
 0.433
Your Current Organism:
Nothoprocta perdicaria
NCBI taxonomy Id: 30464
Other names: N. perdicaria
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.