STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPTBN1Spectrin beta, non-erythrocytic 1. (2343 aa)    
Predicted Functional Partners:
SPTAN1
Spectrin alpha, non-erythrocytic 1.
   
0.921
ENSNPEP00000001579
annotation not available
   
 0.725
ENSNPEP00000001584
annotation not available
   
 0.725
ENSNPEP00000001591
annotation not available
   
 0.725
ANK1
Ankyrin 1.
   
 0.725
ENSNPEP00000015187
annotation not available
   
 0.725
ENSNPEP00000015190
annotation not available
   
 0.693
ENSNPEP00000021099
annotation not available
   
 0.693
ITSN2
Intersectin 2.
     
 0.680
ANKDD1B
Ankyrin repeat and death domain containing 1B.
   
 0.658
Your Current Organism:
Nothoprocta perdicaria
NCBI taxonomy Id: 30464
Other names: N. perdicaria
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.