STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLN8CLN8 transmembrane ER and ERGIC protein. (285 aa)    
Predicted Functional Partners:
ENSNPEP00000011397
annotation not available
    
 
 0.663
CLN5
CLN5 intracellular trafficking protein.
      
 0.580
PPT1
Palmitoyl-protein thioesterase 1.
      
 0.578
MFSD8
Major facilitator superfamily domain containing 8.
      
 0.573
TPP1
Tripeptidyl peptidase 1.
    
 
 0.551
CGGBP1
CGG triplet repeat binding protein 1.
    
 
 0.525
IKZF1
IKAROS family zinc finger 1.
    
 
 0.490
ENSNPEP00000012210
annotation not available
    
 
 0.485
ENSNPEP00000011634
annotation not available
      
 0.481
ENSNPEP00000011637
annotation not available
      
 0.481
Your Current Organism:
Nothoprocta perdicaria
NCBI taxonomy Id: 30464
Other names: N. perdicaria
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.