CSMD1 protein (Nothoprocta perdicaria) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CSMD1

CUB and Sushi multiple domains 1. (3469 aa)

Predicted Functional Partners:

TNC

0.564

ENSNPEP00000011255

0.564

TNN

0.564

TNR

0.564

ENSNPEP00000002521

0.545

ENSNPEP00000002524

0.545

ENSNPEP00000018811

0.545

ADGRL2

0.509

ADGRL3

0.509

ENSNPEP00000007008

0.509

Your Current Organism:

Nothoprocta perdicaria

NCBI taxonomy Id: 30464
Other names: N. perdicaria

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADGRL2	CSMD1	ENSNPEP00000001264	ENSNPEP00000021386	Adhesion G protein-coupled receptor L2.	CUB and Sushi multiple domains 1.	0.509
ADGRL3	CSMD1	ENSNPEP00000004637	ENSNPEP00000021386	Adhesion G protein-coupled receptor L3.	CUB and Sushi multiple domains 1.	0.509
CSMD1	ADGRL2	ENSNPEP00000021386	ENSNPEP00000001264	CUB and Sushi multiple domains 1.	Adhesion G protein-coupled receptor L2.	0.509
CSMD1	ADGRL3	ENSNPEP00000021386	ENSNPEP00000004637	CUB and Sushi multiple domains 1.	Adhesion G protein-coupled receptor L3.	0.509
CSMD1	ENSNPEP00000002521	ENSNPEP00000021386	ENSNPEP00000002521	CUB and Sushi multiple domains 1.	annotation not available	0.545
CSMD1	ENSNPEP00000002524	ENSNPEP00000021386	ENSNPEP00000002524	CUB and Sushi multiple domains 1.	annotation not available	0.545
CSMD1	ENSNPEP00000007008	ENSNPEP00000021386	ENSNPEP00000007008	CUB and Sushi multiple domains 1.	annotation not available	0.509
CSMD1	ENSNPEP00000011255	ENSNPEP00000021386	ENSNPEP00000011255	CUB and Sushi multiple domains 1.	annotation not available	0.564
CSMD1	ENSNPEP00000018811	ENSNPEP00000021386	ENSNPEP00000018811	CUB and Sushi multiple domains 1.	annotation not available	0.545
CSMD1	TNC	ENSNPEP00000021386	ENSNPEP00000005683	CUB and Sushi multiple domains 1.	Tenascin C.	0.564
CSMD1	TNN	ENSNPEP00000021386	ENSNPEP00000012311	CUB and Sushi multiple domains 1.	Tenascin N.	0.564
CSMD1	TNR	ENSNPEP00000021386	ENSNPEP00000014941	CUB and Sushi multiple domains 1.	Tenascin R.	0.564
ENSNPEP00000002521	CSMD1	ENSNPEP00000002521	ENSNPEP00000021386	annotation not available	CUB and Sushi multiple domains 1.	0.545
ENSNPEP00000002521	ENSNPEP00000002524	ENSNPEP00000002521	ENSNPEP00000002524	annotation not available	annotation not available	0.585
ENSNPEP00000002521	ENSNPEP00000011255	ENSNPEP00000002521	ENSNPEP00000011255	annotation not available	annotation not available	0.886
ENSNPEP00000002521	ENSNPEP00000018811	ENSNPEP00000002521	ENSNPEP00000018811	annotation not available	annotation not available	0.628
ENSNPEP00000002521	TNC	ENSNPEP00000002521	ENSNPEP00000005683	annotation not available	Tenascin C.	0.886
ENSNPEP00000002521	TNN	ENSNPEP00000002521	ENSNPEP00000012311	annotation not available	Tenascin N.	0.886
ENSNPEP00000002521	TNR	ENSNPEP00000002521	ENSNPEP00000014941	annotation not available	Tenascin R.	0.886
ENSNPEP00000002524	CSMD1	ENSNPEP00000002524	ENSNPEP00000021386	annotation not available	CUB and Sushi multiple domains 1.	0.545