Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALDH1L2 | ATIC | ENSNPEP00000021261 | ENSNPEP00000012479 | Aldehyde dehydrogenase 1 family member L2. | 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase. | 0.545 |
ALDH1L2 | DHFR | ENSNPEP00000021261 | ENSNPEP00000021434 | Aldehyde dehydrogenase 1 family member L2. | Dihydrofolate reductase. | 0.921 |
ALDH1L2 | GART | ENSNPEP00000021261 | ENSNPEP00000007305 | Aldehyde dehydrogenase 1 family member L2. | annotation not available | 0.948 |
ALDH1L2 | GLDC | ENSNPEP00000021261 | ENSNPEP00000012680 | Aldehyde dehydrogenase 1 family member L2. | Glycine decarboxylase. | 0.668 |
ALDH1L2 | LOC112948159 | ENSNPEP00000021261 | ENSNPEP00000007288 | Aldehyde dehydrogenase 1 family member L2. | Trifunctional purine biosynthetic protein adenosine-3-like. | 0.948 |
ALDH1L2 | MTHFR | ENSNPEP00000021261 | ENSNPEP00000011296 | Aldehyde dehydrogenase 1 family member L2. | Methylenetetrahydrofolate reductase. | 0.528 |
ATIC | ALDH1L2 | ENSNPEP00000012479 | ENSNPEP00000021261 | 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase. | Aldehyde dehydrogenase 1 family member L2. | 0.545 |
ATIC | DHFR | ENSNPEP00000012479 | ENSNPEP00000021434 | 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase. | Dihydrofolate reductase. | 0.935 |
ATIC | FPGS | ENSNPEP00000012479 | ENSNPEP00000003251 | 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase. | Folylpolyglutamate synthase. | 0.631 |
ATIC | GART | ENSNPEP00000012479 | ENSNPEP00000007305 | 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase. | annotation not available | 0.999 |
ATIC | GLDC | ENSNPEP00000012479 | ENSNPEP00000012680 | 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase. | Glycine decarboxylase. | 0.824 |
ATIC | LOC112948159 | ENSNPEP00000012479 | ENSNPEP00000007288 | 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase. | Trifunctional purine biosynthetic protein adenosine-3-like. | 0.999 |
ATIC | MTFMT | ENSNPEP00000012479 | ENSNPEP00000010928 | 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase. | Mitochondrial methionyl-tRNA formyltransferase. | 0.928 |
ATIC | MTHFR | ENSNPEP00000012479 | ENSNPEP00000011296 | 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase. | Methylenetetrahydrofolate reductase. | 0.940 |
ATIC | TK1 | ENSNPEP00000012479 | ENSNPEP00000013415 | 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase. | Thymidine kinase 1. | 0.579 |
ATIC | TYMS | ENSNPEP00000012479 | ENSNPEP00000018158 | 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase. | Thymidylate synthetase. | 0.935 |
DHFR | ALDH1L2 | ENSNPEP00000021434 | ENSNPEP00000021261 | Dihydrofolate reductase. | Aldehyde dehydrogenase 1 family member L2. | 0.921 |
DHFR | ATIC | ENSNPEP00000021434 | ENSNPEP00000012479 | Dihydrofolate reductase. | 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase. | 0.935 |
DHFR | FPGS | ENSNPEP00000021434 | ENSNPEP00000003251 | Dihydrofolate reductase. | Folylpolyglutamate synthase. | 0.926 |
DHFR | GART | ENSNPEP00000021434 | ENSNPEP00000007305 | Dihydrofolate reductase. | annotation not available | 0.958 |
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