STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHFPL3LHFPL tetraspan subfamily member 3. (256 aa)    
Predicted Functional Partners:
PCDH15
Protocadherin related 15.
    
 0.755
LOC112952053
VIP peptides-like.
    
 0.755
TMC3
Transmembrane channel like 3.
   
 
 0.729
CIB2
Calcium and integrin binding family member 2.
     
 0.728
TMC2
Transmembrane channel like 2.
   
 
 0.624
CIB3
Calcium and integrin binding family member 3.
     
 0.530
ENSNPEP00000011169
annotation not available
     
 0.528
ENSNPEP00000006184
annotation not available
   
 0.503
CDH23
Cadherin related 23.
   
 0.503
LOC112946771
Cadherin-7.
   
 0.486
Your Current Organism:
Nothoprocta perdicaria
NCBI taxonomy Id: 30464
Other names: N. perdicaria
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.