STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GIPC1GIPC PDZ domain containing family member 1. (333 aa)    
Predicted Functional Partners:
MYO6
Myosin VI.
    
 
 0.880
APPL2
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.
   
 
 0.773
APPL1
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.
   
 
 0.773
COG3
Component of oligomeric golgi complex 3.
      
 0.509
LEMD2
LEM domain containing 2.
      
 0.508
LRCH3
Leucine rich repeats and calponin homology domain containing 3.
      
 0.489
ENSBGRP00000042417
annotation not available
      
 0.487
ENSBGRP00000038904
annotation not available
    
 
 0.453
ENSBGRP00000038928
annotation not available
    
 
 0.453
ST6GALNAC3
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3.
      
 0.435
Your Current Organism:
Bos grunniens
NCBI taxonomy Id: 30521
Other names: B. grunniens, Bos mutus grunniens, Peophagus grunniens, domestic yak, yak
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.