STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXC13Homeobox C13. (330 aa)    
Predicted Functional Partners:
KRT35
Keratin 35.
   
  
 0.782
FOXN1
Forkhead box N1.
   
 
 0.778
KRT82
Keratin 82.
      
 0.673
MSX2
Msh homeobox 2.
   
  
0.657
KRT32
Keratin 32.
      
 0.652
LEF1
Lymphoid enhancer binding factor 1.
    
 
 0.630
KRT71
Keratin 71.
   
  
 0.624
DSG4
Desmoglein 4.
      
 0.600
LHX2
LIM homeobox 2.
    
 
 0.587
VSIG8
V-set and immunoglobulin domain containing 8.
      
 0.585
Your Current Organism:
Bos grunniens
NCBI taxonomy Id: 30521
Other names: B. grunniens, Bos mutus grunniens, Peophagus grunniens, domestic yak, yak
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.