STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JRKJrk helix-turn-helix protein. (596 aa)    
Predicted Functional Partners:
UBE2I
Ubiquitin conjugating enzyme E2 I.
    
  0.575
NAIF1
Nuclear apoptosis inducing factor 1.
   
  
 0.516
SMARCAL1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1.
    
 0.441
THEM6
Thioesterase superfamily member 6.
   
  
 0.426
THAP9
THAP domain containing 9.
      
 0.424
C8orf33
Chromosome 8 open reading frame 33.
      
 0.420
FANCM
FA complementation group M.
   
  
 0.414
RMI2
RecQ mediated genome instability 2.
   
  
 0.407
RFLNA
Refilin A.
      
 0.405
ZNF34
Zinc finger protein 34.
      
 0.405
Your Current Organism:
Bos grunniens
NCBI taxonomy Id: 30521
Other names: B. grunniens, Bos mutus grunniens, Peophagus grunniens, domestic yak, yak
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.