STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RTN1Reticulon 1. (702 aa)    
Predicted Functional Partners:
SPAST
Spastin.
   
 
 0.716
MAPT
Microtubule associated protein tau.
   
  
 0.692
VSNL1
Visinin like 1.
   
  
 0.656
RTN4
Reticulon 4.
    
 
0.643
REEP2
Receptor accessory protein 2.
   
 
 0.628
BACE1
Beta-secretase 1.
   
 0.619
ENSBGRP00000024163
annotation not available
    
 
0.600
ATL1
Atlastin GTPase 1.
   
 
 0.586
VTA1
Vesicle trafficking 1.
    
   0.582
CCDC175
Coiled-coil domain containing 175.
   
  
 0.579
Your Current Organism:
Bos grunniens
NCBI taxonomy Id: 30521
Other names: B. grunniens, Bos mutus grunniens, Peophagus grunniens, domestic yak, yak
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.