STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRIPTCXXC repeat containing interactor of PDZ3 domain. (101 aa)    
Predicted Functional Partners:
ARMC7
Armadillo repeat containing 7.
    
 
 0.793
PHF5A
PHD finger protein 5A.
   
   0.776
SF3B1
Splicing factor 3b subunit 1.
    
   0.767
PRPF8
pre-mRNA processing factor 8.
    
   0.767
SF3B3
Splicing factor 3b subunit 3.
    
   0.767
ENSBGRP00000031054
annotation not available
    
   0.767
RBM48
RNA binding motif protein 48.
   
 
 0.605
DHX16
DEAH-box helicase 16.
    
 
 0.604
CWC15
CWC15 spliceosome associated protein homolog.
   
   0.599
DLG4
Discs large MAGUK scaffold protein 4.
    
 
 0.596
Your Current Organism:
Bos grunniens
NCBI taxonomy Id: 30521
Other names: B. grunniens, Bos mutus grunniens, Peophagus grunniens, domestic yak, yak
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.