STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYT13Synaptotagmin 13. (426 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
     
 0.626
PDZD11
PDZ domain containing 11.
      
 0.586
ITSN2
Intersectin 2.
     
 0.586
STXBP5
Syntaxin binding protein 5.
      
 0.555
MED31
Mediator complex subunit 31.
      
 0.491
HEPHL1
Hephaestin like 1.
      
 0.491
CSRNP3
Cysteine and serine rich nuclear protein 3.
      
 0.491
UNC13A
Unc-13 homolog A.
   
 
 0.489
LIN7C
Lin-7 homolog C, crumbs cell polarity complex component.
     
 0.472
VAMP1
Vesicle associated membrane protein 1.
    
 0.469
Your Current Organism:
Bos grunniens
NCBI taxonomy Id: 30521
Other names: B. grunniens, Bos mutus grunniens, Peophagus grunniens, domestic yak, yak
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.