STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHYHIPphytanoyl-CoA 2-hydroxylase interacting protein. (330 aa)    
Predicted Functional Partners:
FAM78A
Family with sequence similarity 78 member A.
      
 0.495
RETSAT
Retinol saturase.
      
 0.472
TCF23
Transcription factor 23.
      
 0.472
CPNE6
Copine 6.
   
  
 0.468
LIMS2
LIM zinc finger domain containing 2.
      
 0.443
ARNTL2
Aryl hydrocarbon receptor nuclear translocator like 2.
      
 0.433
PLCL1
Phospholipase C like 1 (inactive).
      
 0.432
ENSBGRP00000018724
annotation not available
    
 
 0.431
CIART
Circadian associated repressor of transcription.
      
 0.429
RASL11A
RAS like family 11 member A.
      
 0.426
Your Current Organism:
Bos grunniens
NCBI taxonomy Id: 30521
Other names: B. grunniens, Bos mutus grunniens, Peophagus grunniens, domestic yak, yak
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.