STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBE2D1Ubiquitin conjugating enzyme E2 D1. (147 aa)    
Predicted Functional Partners:
STUB1
STIP1 homology and U-box containing protein 1.
   
 0.965
RNF4
Ring finger protein 4.
   
 0.951
UBE2V1
Ubiquitin conjugating enzyme E2 V1.
   
 0.928
ENSBGRP00000006561
annotation not available
   
 0.928
MYLIP
Myosin regulatory light chain interacting protein.
   
 0.909
ENSBGRP00000010149
annotation not available
   
 0.879
ENSBGRP00000013752
annotation not available
   
 0.879
ENSBGRP00000019544
annotation not available
  
 
 
0.858
TRIP12
Thyroid hormone receptor interactor 12.
   
 0.857
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.856
Your Current Organism:
Bos grunniens
NCBI taxonomy Id: 30521
Other names: B. grunniens, Bos mutus grunniens, Peophagus grunniens, domestic yak, yak
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.