STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPP1CCProtein phosphatase 1 catalytic subunit gamma. (318 aa)    
Predicted Functional Partners:
PPP1R3A
Protein phosphatase 1 regulatory subunit 3A.
    
 0.975
CPSF3
Cleavage and polyadenylation specific factor 3.
   
 0.972
CPSF2
Cleavage and polyadenylation specific factor 2.
   
 0.971
WDR33
WD repeat domain 33.
   
 0.969
TP53BP2
Tumor protein p53 binding protein 2.
    
 0.963
RB1
RB transcriptional corepressor 1.
   
 0.963
PPP1R12A
Protein phosphatase 1 regulatory subunit 12A.
   
 0.961
PPP1R12B
Protein phosphatase 1 regulatory subunit 12B.
   
 0.961
SHOC2
SHOC2 leucine rich repeat scaffold protein.
    
 0.958
PPP1CB
Protein phosphatase 1 catalytic subunit beta.
  
0.956
Your Current Organism:
Bos grunniens
NCBI taxonomy Id: 30521
Other names: B. grunniens, Bos mutus grunniens, Peophagus grunniens, domestic yak, yak
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.