STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCGNSecretagogin, EF-hand calcium binding protein. (276 aa)    
Predicted Functional Partners:
SNAP25
Synaptosome associated protein 25.
   
 0.843
GRM6
Glutamate metabotropic receptor 6.
    
 
 0.744
VSX1
Visual system homeobox 1.
      
 0.692
MARK1
Microtubule affinity regulating kinase 1.
     
 0.689
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.683
MAGI3
Membrane associated guanylate kinase, WW and PDZ domain containing 3.
   
 0.659
SIK3
SIK family kinase 3.
   
 0.653
SEBOX
SEBOX homeobox.
    
 
 0.614
CDK17
Cyclin dependent kinase 17.
   
 
 0.594
GPATCH1
G-patch domain containing 1.
      
 0.586
Your Current Organism:
Bos grunniens
NCBI taxonomy Id: 30521
Other names: B. grunniens, Bos mutus grunniens, Peophagus grunniens, domestic yak, yak
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.