STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPDC1Protein tyrosine phosphatase domain containing 1. (796 aa)    
Predicted Functional Partners:
ERCC6L
ERCC excision repair 6 like, spindle assembly checkpoint helicase.
   
  
 0.712
CCDC73
Coiled-coil domain containing 73.
      
 0.709
ENSBGRP00000025361
annotation not available
      
 0.708
DRD5
Dopamine receptor D5.
      
 0.693
KIF20A
Kinesin family member 20A.
   
  
 0.688
GPER1
G protein-coupled estrogen receptor 1.
      
 0.688
IPPK
Inositol-pentakisphosphate 2-kinase.
      
 0.687
SETD2
SET domain containing 2, histone lysine methyltransferase.
    
 
 0.657
FOXD2
Forkhead box D2.
      
 0.617
CYP8B1
Cytochrome P450 family 8 subfamily B member 1.
   
  
 0.584
Your Current Organism:
Bos grunniens
NCBI taxonomy Id: 30521
Other names: B. grunniens, Bos mutus grunniens, Peophagus grunniens, domestic yak, yak
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.