STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSBGRP00000027955annotation not available (174 aa)    
Predicted Functional Partners:
EIF4A3
Eukaryotic translation initiation factor 4A3.
   
 0.982
MAGOH
Mago homolog, exon junction complex subunit.
   
 0.981
CASC3
CASC3 exon junction complex subunit.
   
 0.981
PYM1
PYM homolog 1, exon junction complex associated factor.
    
 0.976
UPF2
UPF2 regulator of nonsense mediated mRNA decay.
    
 0.945
UPF1
UPF1 RNA helicase and ATPase.
    
 0.935
ENSBGRP00000034528
annotation not available
   
 0.907
ENSBGRP00000024307
annotation not available
   
 0.901
ENSBGRP00000035898
annotation not available
    
 
 0.899
SLU7
SLU7 homolog, splicing factor.
   
 0.889
Your Current Organism:
Bos grunniens
NCBI taxonomy Id: 30521
Other names: B. grunniens, Bos mutus grunniens, Peophagus grunniens, domestic yak, yak
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.