STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VNN3Vanin 3. (207 aa)    
Predicted Functional Partners:
NUDT15
Nudix hydrolase 15.
    
 0.609
OPLAH
5-oxoprolinase, ATP-hydrolysing.
    
 0.592
PANK4
Pantothenate kinase 4 (inactive).
     
 0.569
QPRT
Quinolinate phosphoribosyltransferase.
  
 
 0.557
ENSBGRP00000042488
annotation not available
   
 
 0.556
SMS
Spermine synthase.
  
 
 0.536
SRM
Spermidine synthase.
  
 
 0.536
ENSBGRP00000003077
annotation not available
  
 
 0.500
QRSL1
glutaminyl-tRNA amidotransferase subunit QRSL1.
  
 
 0.500
AGXT
Alanine--glyoxylate and serine--pyruvate aminotransferase.
  
 
 0.478
Your Current Organism:
Bos grunniens
NCBI taxonomy Id: 30521
Other names: B. grunniens, Bos mutus grunniens, Peophagus grunniens, domestic yak, yak
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.