STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLHL30Kelch like family member 30. (579 aa)    
Predicted Functional Partners:
PRPF40A
pre-mRNA processing factor 40 homolog A.
    
 0.689
NIF3L1
NGG1 interacting factor 3 like 1.
      
 0.681
METTL8
Methyltransferase like 8.
      
 0.621
WDR33
WD repeat domain 33.
     
 0.616
PTPRN
Protein tyrosine phosphatase receptor type N.
      
 0.615
UGGT1
UDP-glucose glycoprotein glucosyltransferase 1.
      
 0.522
UBR3
Ubiquitin protein ligase E3 component n-recognin 3.
   
  
 0.495
MARCHF7
Membrane associated ring-CH-type finger 7.
      
 0.475
UBE3C
Ubiquitin protein ligase E3C.
     
 0.463
KATNAL2
Katanin catalytic subunit A1 like 2.
   
 
 0.458
Your Current Organism:
Bos grunniens
NCBI taxonomy Id: 30521
Other names: B. grunniens, Bos mutus grunniens, Peophagus grunniens, domestic yak, yak
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.