STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MSGN1Mesogenin 1. (193 aa)    
Predicted Functional Partners:
TBX6
T-box transcription factor 6.
   
 0.698
GEN1
GEN1 Holliday junction 5' flap endonuclease.
      
 0.587
SMC6
Structural maintenance of chromosomes 6.
      
 0.515
MESP2
Mesoderm posterior bHLH transcription factor 2.
   
  
0.495
DPCD
Deleted in primary ciliary dyskinesia homolog (mouse).
      
 0.495
VSNL1
Visinin like 1.
      
 0.489
HES7
Hes family bHLH transcription factor 7.
   
 
 0.452
TCF12
Transcription factor 12.
    
 0.441
TCF3
Transcription factor 3.
    
 0.441
TCF4
Transcription factor 4.
    
 0.441
Your Current Organism:
Bos grunniens
NCBI taxonomy Id: 30521
Other names: B. grunniens, Bos mutus grunniens, Peophagus grunniens, domestic yak, yak
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.