STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM126ATransmembrane protein 126A. (197 aa)    
Predicted Functional Partners:
APOO
MICOS complex subunit; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.
   
   0.773
SSBP1
Single stranded DNA binding protein 1.
   
 
 0.772
TMEM109
Transmembrane protein 109.
      
 0.769
NDUFAF1
NADH:ubiquinone oxidoreductase complex assembly factor 1.
   
 
 0.756
CCDC58
Coiled-coil domain containing 58.
   
    0.748
TMEM41A
Uncharacterized protein.
      
 0.724
MARCH5
Membrane associated ring-CH-type finger 5.
      
 0.700
ACADVL
Acyl-CoA dehydrogenase very long chain.
     
 0.699
RTN4IP1
Reticulon 4 interacting protein 1.
   
  
 0.698
ACAD9
Acyl-CoA dehydrogenase family member 9.
     
 0.697
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.