STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C8orf33Chromosome 8 open reading frame 33. (207 aa)    
Predicted Functional Partners:
ZNF34
Zinc finger protein 34.
      
 0.596
IMP4
IMP U3 small nucleolar ribonucleoprotein 4.
   
    0.517
COMMD5
COMM domain containing 5.
   
  
 0.498
TXNDC5
Thioredoxin domain containing 5.
      
 0.489
CYHR1
Cysteine and histidine rich 1.
      
 0.483
ZNF250
Zinc finger protein 250.
      
 0.472
ZNF16
Zinc finger protein 16.
      
 0.472
LTBP3
Latent transforming growth factor beta binding protein 3.
      
 0.469
OGA
O-GlcNAcase.
   
  
 0.468
C8orf82
Chromosome 8 open reading frame 82.
      
 0.467
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.