STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC167Coiled-coil domain containing 167. (97 aa)    
Predicted Functional Partners:
ARFGEF3
ARFGEF family member 3.
      
 0.724
LRRTM4
Leucine rich repeat transmembrane neuronal 4.
      
 0.723
PRKCSH
Protein kinase C substrate 80K-H.
      
 0.691
CHMP7
Charged multivesicular body protein 7.
      
 0.685
PKIA
cAMP-dependent protein kinase inhibitor alpha.
      
 0.578
SAC3D1
SAC3 domain containing 1.
      
 0.529
RRM1
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
      
 0.491
FN3KRP
Fructosamine 3 kinase related protein; Belongs to the fructosamine kinase family.
      
 0.487
CCDC106
Coiled-coil domain containing 106.
      
 0.476
CCDC34
Coiled-coil domain containing 34.
      
 0.472
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.