STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENDOD1Endonuclease domain containing 1. (500 aa)    
Predicted Functional Partners:
TMEM33
Transmembrane protein 33.
    
 
 0.803
TMEM43
Transmembrane protein 43.
    
 0.797
TMED1
Transmembrane p24 trafficking protein 1.
      
 0.782
TRDMT1
tRNA aspartic acid methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
      
 0.723
TM2D1
TM2 domain containing 1.
      
 0.723
C2CD2
C2 calcium dependent domain containing 2.
      
 0.703
RCAN3
RCAN family member 3.
      
 0.689
FAM8A1
Family with sequence similarity 8 member A1.
      
 0.678
MSL3
MSL complex subunit 3.
    
 0.662
UAP1
UDP-N-acetylglucosamine pyrophosphorylase 1.
     
 0.628
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.