Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BCCIP | PRIMPOL | A0A4W2DVG8 | A0A4W2C0Y0 | BRCA2 and CDKN1A-interacting protein; May promote cell cycle arrest by enhancing the inhibition of CDK2 activity by CDKN1A. May be required for repair of DNA damage by homologous recombination in conjunction with BRCA2. May not be involved in non-homologous end joining (NHEJ); Belongs to the BCP1 family. | Primase and DNA directed polymerase. | 0.576 |
CLSPN | PRIMPOL | A0A4W2EX83 | A0A4W2C0Y0 | Claspin. | Primase and DNA directed polymerase. | 0.924 |
CLSPN | RPA1 | A0A4W2EX83 | A0A4W2HLX4 | Claspin. | Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. | 0.962 |
CLSPN | RPA3 | A0A4W2EX83 | A0A4W2EWC7 | Claspin. | Replication protein A3. | 0.959 |
CLSPN | TIMELESS | A0A4W2EX83 | A0A4W2FVR6 | Claspin. | Timeless circadian regulator. | 0.955 |
CLSPN | TIPIN | A0A4W2EX83 | A0A4W2ETE6 | Claspin. | TIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family. | 0.934 |
FBXL2 | PRIMPOL | A0A4W2BUH4 | A0A4W2C0Y0 | F-box and leucine rich repeat protein 2. | Primase and DNA directed polymerase. | 0.579 |
PRIMPOL | BCCIP | A0A4W2C0Y0 | A0A4W2DVG8 | Primase and DNA directed polymerase. | BRCA2 and CDKN1A-interacting protein; May promote cell cycle arrest by enhancing the inhibition of CDK2 activity by CDKN1A. May be required for repair of DNA damage by homologous recombination in conjunction with BRCA2. May not be involved in non-homologous end joining (NHEJ); Belongs to the BCP1 family. | 0.576 |
PRIMPOL | CLSPN | A0A4W2C0Y0 | A0A4W2EX83 | Primase and DNA directed polymerase. | Claspin. | 0.924 |
PRIMPOL | FBXL2 | A0A4W2C0Y0 | A0A4W2BUH4 | Primase and DNA directed polymerase. | F-box and leucine rich repeat protein 2. | 0.579 |
PRIMPOL | RFWD3 | A0A4W2C0Y0 | A0A4W2BXI5 | Primase and DNA directed polymerase. | Ring finger and WD repeat domain 3. | 0.908 |
PRIMPOL | RPA1 | A0A4W2C0Y0 | A0A4W2HLX4 | Primase and DNA directed polymerase. | Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. | 0.984 |
PRIMPOL | RPA3 | A0A4W2C0Y0 | A0A4W2EWC7 | Primase and DNA directed polymerase. | Replication protein A3. | 0.918 |
PRIMPOL | SMARCAL1 | A0A4W2C0Y0 | A0A4W2CLM3 | Primase and DNA directed polymerase. | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1; Belongs to the SNF2/RAD54 helicase family. SMARCAL1 subfamily. | 0.974 |
PRIMPOL | TIMELESS | A0A4W2C0Y0 | A0A4W2FVR6 | Primase and DNA directed polymerase. | Timeless circadian regulator. | 0.923 |
PRIMPOL | TIPIN | A0A4W2C0Y0 | A0A4W2ETE6 | Primase and DNA directed polymerase. | TIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family. | 0.923 |
PRIMPOL | ZRANB3 | A0A4W2C0Y0 | A0A4W2DFL6 | Primase and DNA directed polymerase. | Zinc finger RANBP2-type containing 3. | 0.921 |
RFWD3 | PRIMPOL | A0A4W2BXI5 | A0A4W2C0Y0 | Ring finger and WD repeat domain 3. | Primase and DNA directed polymerase. | 0.908 |
RFWD3 | RPA1 | A0A4W2BXI5 | A0A4W2HLX4 | Ring finger and WD repeat domain 3. | Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. | 0.923 |
RFWD3 | RPA3 | A0A4W2BXI5 | A0A4W2EWC7 | Ring finger and WD repeat domain 3. | Replication protein A3. | 0.949 |
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