STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RFNGBeta-1,3-N-acetylglucosaminyltransferase. (336 aa)    
Predicted Functional Partners:
NOTCH3
Notch receptor 3.
    
 0.910
NOTCH2
Notch receptor 2.
    
 0.909
NOTCH4
Notch receptor 4.
   
 0.899
MFNG
Beta-1,3-N-acetylglucosaminyltransferase.
  
  
 
0.894
LFNG
Beta-1,3-N-acetylglucosaminyltransferase.
  
  
 
0.893
NOTCH1
Notch receptor 1.
    
 0.845
NELFB
Negative elongation factor complex member B.
   
 0.706
LRRC42
Leucine rich repeat containing 42.
      
 0.666
MPLKIP
M-phase specific PLK1 interacting protein.
      
 0.661
POLR2H
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
  0.593
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.