STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP16Matrix metallopeptidase 16. (607 aa)    
Predicted Functional Partners:
GNAI2
G protein subunit alpha i2.
     
 0.945
GNAI1
G protein subunit alpha i1.
     
 0.892
GNAI3
G protein subunit alpha i3.
     
 0.892
TIMP2
TIMP metallopeptidase inhibitor 2.
   
 0.859
MMP13
Matrix metallopeptidase 13.
  
 
0.849
A0A4W2D8G7
Uncharacterized protein.
   
 0.811
HBEGF
Heparin binding EGF like growth factor.
   
 0.811
MMP14
Matrix metallopeptidase 14.
  
  
0.768
MMP24
Matrix metallopeptidase 24.
  
  
 
0.751
TIMP3
TIMP metallopeptidase inhibitor 3.
   
 0.745
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.