STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC38A10Solute carrier family 38 member 10. (1089 aa)    
Predicted Functional Partners:
SLC36A2
Solute carrier family 36 member 2.
    
 
 0.579
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 
 0.517
TRPM2
Transient receptor potential cation channel subfamily M member 2.
  
  
 0.509
NPEPL1
Aminopeptidase like 1.
      
 0.499
LAMTOR2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
 0.493
SHISA4
Shisa family member 4.
   
  
 0.488
SLC38A9
Solute carrier family 38 member 9.
      
 0.478
RBMS3
RNA binding motif single stranded interacting protein 3.
      
 0.475
SLC7A8
Solute carrier family 7 member 8.
   
  
 0.473
SLC1A7
Amino acid transporter.
    
 
 0.472
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.