Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A4W2DQZ3 | DDX28 | A0A4W2DQZ3 | A0A4W2CBE8 | SpoU_sub_bind domain-containing protein. | DEAD-box helicase 28. | 0.939 |
A0A4W2DQZ3 | MALSU1 | A0A4W2DQZ3 | A0A4W2DWV5 | SpoU_sub_bind domain-containing protein. | Mitochondrial assembly of ribosomal large subunit 1. | 0.967 |
DDX28 | A0A4W2DQZ3 | A0A4W2CBE8 | A0A4W2DQZ3 | DEAD-box helicase 28. | SpoU_sub_bind domain-containing protein. | 0.939 |
DDX28 | DDX49 | A0A4W2CBE8 | A0A4W2EX07 | DEAD-box helicase 28. | DEAD-box helicase 49; Belongs to the DEAD box helicase family. | 0.868 |
DDX28 | DDX52 | A0A4W2CBE8 | A0A4W2BTC6 | DEAD-box helicase 28. | DExD-box helicase 52. | 0.879 |
DDX28 | ESF1 | A0A4W2CBE8 | A0A4W2EJD5 | DEAD-box helicase 28. | ESF1 nucleolar pre-rRNA processing protein homolog. | 0.913 |
DDX28 | KRR1 | A0A4W2CBE8 | A0A4W2DB95 | DEAD-box helicase 28. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.870 |
DDX28 | MALSU1 | A0A4W2CBE8 | A0A4W2DWV5 | DEAD-box helicase 28. | Mitochondrial assembly of ribosomal large subunit 1. | 0.885 |
DDX28 | NGDN | A0A4W2CBE8 | A0A4W2D6I3 | DEAD-box helicase 28. | Neuroguidin. | 0.951 |
DDX28 | NOP14 | A0A4W2CBE8 | A0A4W2EQV9 | DEAD-box helicase 28. | NOP14 nucleolar protein. | 0.872 |
DDX28 | UTP3 | A0A4W2CBE8 | A0A4W2D9M2 | DEAD-box helicase 28. | UTP3 small subunit processome component. | 0.966 |
DDX28 | WDR46 | A0A4W2CBE8 | A0A4W2BY75 | DEAD-box helicase 28. | WD repeat domain 46. | 0.896 |
DDX49 | DDX28 | A0A4W2EX07 | A0A4W2CBE8 | DEAD-box helicase 49; Belongs to the DEAD box helicase family. | DEAD-box helicase 28. | 0.868 |
DDX49 | DDX52 | A0A4W2EX07 | A0A4W2BTC6 | DEAD-box helicase 49; Belongs to the DEAD box helicase family. | DExD-box helicase 52. | 0.974 |
DDX49 | ESF1 | A0A4W2EX07 | A0A4W2EJD5 | DEAD-box helicase 49; Belongs to the DEAD box helicase family. | ESF1 nucleolar pre-rRNA processing protein homolog. | 0.655 |
DDX49 | KRR1 | A0A4W2EX07 | A0A4W2DB95 | DEAD-box helicase 49; Belongs to the DEAD box helicase family. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.962 |
DDX49 | NGDN | A0A4W2EX07 | A0A4W2D6I3 | DEAD-box helicase 49; Belongs to the DEAD box helicase family. | Neuroguidin. | 0.913 |
DDX49 | NOP14 | A0A4W2EX07 | A0A4W2EQV9 | DEAD-box helicase 49; Belongs to the DEAD box helicase family. | NOP14 nucleolar protein. | 0.955 |
DDX49 | UTP3 | A0A4W2EX07 | A0A4W2D9M2 | DEAD-box helicase 49; Belongs to the DEAD box helicase family. | UTP3 small subunit processome component. | 0.994 |
DDX49 | WDR46 | A0A4W2EX07 | A0A4W2BY75 | DEAD-box helicase 49; Belongs to the DEAD box helicase family. | WD repeat domain 46. | 0.984 |
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