STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECHDC3Enoyl-CoA hydratase domain containing 3. (300 aa)    
Predicted Functional Partners:
PROSER2
Uncharacterized protein.
      
 0.577
NUDT5
Nudix hydrolase 5; Belongs to the Nudix hydrolase family.
   
  
 0.494
PECR
Peroxisomal trans-2-enoyl-CoA reductase.
   
  
 0.487
CENPV
GFA domain-containing protein.
      
 0.485
USP6NL
USP6 N-terminal like.
      
 0.485
SEC61A2
SEC61 translocon alpha 2 subunit.
      
 0.483
SLC5A12
Solute carrier family 5 member 12; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
      
 0.478
GNPDA1
Glucosamine-6-phosphate isomerase.
      
 0.468
CDC123
Cell division cycle protein 123 homolog; Required for S phase entry of the cell cycle. Belongs to the CDC123 family.
      
 0.467
CELF2
CUGBP Elav-like family member 2.
      
 0.467
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.