Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CNOT1 | DCP1A | A0A4W2GAF0 | A0A4W2DQ95 | CCR4-NOT transcription complex subunit 1. | Decapping mRNA 1A. | 0.471 |
CNOT1 | DCP2 | A0A4W2GAF0 | A0A4W2C690 | CCR4-NOT transcription complex subunit 1. | Decapping mRNA 2. | 0.506 |
CNOT1 | EDC3 | A0A4W2GAF0 | A0A4W2FEE8 | CCR4-NOT transcription complex subunit 1. | Enhancer of mRNA decapping 3. | 0.424 |
CNOT1 | KIF1BP | A0A4W2GAF0 | A0A4W2CEJ1 | CCR4-NOT transcription complex subunit 1. | KIF1 binding protein. | 0.885 |
CNOT1 | PATL1 | A0A4W2GAF0 | A0A4W2CLZ5 | CCR4-NOT transcription complex subunit 1. | PAT1 homolog 1, processing body mRNA decay factor. | 0.916 |
CNOT1 | PATL2 | A0A4W2GAF0 | A0A4W2ENU7 | CCR4-NOT transcription complex subunit 1. | PAT1 homolog 2. | 0.859 |
DCP1A | CNOT1 | A0A4W2DQ95 | A0A4W2GAF0 | Decapping mRNA 1A. | CCR4-NOT transcription complex subunit 1. | 0.471 |
DCP1A | DCP1B | A0A4W2DQ95 | A0A4W2E4M8 | Decapping mRNA 1A. | Decapping mRNA 1B. | 0.986 |
DCP1A | DCP2 | A0A4W2DQ95 | A0A4W2C690 | Decapping mRNA 1A. | Decapping mRNA 2. | 0.996 |
DCP1A | EDC3 | A0A4W2DQ95 | A0A4W2FEE8 | Decapping mRNA 1A. | Enhancer of mRNA decapping 3. | 0.993 |
DCP1A | KIF1BP | A0A4W2DQ95 | A0A4W2CEJ1 | Decapping mRNA 1A. | KIF1 binding protein. | 0.875 |
DCP1A | LSM1 | A0A4W2DQ95 | A0A4W2DYR6 | Decapping mRNA 1A. | U6 snRNA-associated Sm-like protein LSm1; Plays a role in the degradation of histone mRNAs, the only eukaryotic mRNAs that are not polyadenylated. Probably also part of an LSm subunits-containing complex involved in the general process of mRNA degradation. | 0.713 |
DCP1A | LSM7 | A0A4W2DQ95 | A0A4W2ERZ9 | Decapping mRNA 1A. | LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated. | 0.669 |
DCP1A | NAXE | A0A4W2DQ95 | A0A4W2F0A5 | Decapping mRNA 1A. | NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX. | 0.886 |
DCP1A | PATL1 | A0A4W2DQ95 | A0A4W2CLZ5 | Decapping mRNA 1A. | PAT1 homolog 1, processing body mRNA decay factor. | 0.905 |
DCP1A | PATL2 | A0A4W2DQ95 | A0A4W2ENU7 | Decapping mRNA 1A. | PAT1 homolog 2. | 0.877 |
DCP1B | DCP1A | A0A4W2E4M8 | A0A4W2DQ95 | Decapping mRNA 1B. | Decapping mRNA 1A. | 0.986 |
DCP1B | DCP2 | A0A4W2E4M8 | A0A4W2C690 | Decapping mRNA 1B. | Decapping mRNA 2. | 0.982 |
DCP1B | EDC3 | A0A4W2E4M8 | A0A4W2FEE8 | Decapping mRNA 1B. | Enhancer of mRNA decapping 3. | 0.990 |
DCP1B | KIF1BP | A0A4W2E4M8 | A0A4W2CEJ1 | Decapping mRNA 1B. | KIF1 binding protein. | 0.875 |
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