STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNX16Sorting nexin 16. (343 aa)    
Predicted Functional Partners:
VPS26A
VPS26, retromer complex component A.
   
 
 0.702
SNX13
Sorting nexin 13.
      
 0.585
KLHL23
Kelch like family member 23.
      
 0.573
SNX2
Sorting nexin 2.
      
 0.544
AP5Z1
Adaptor related protein complex 5 subunit zeta 1.
     
 0.508
SNX15
Sorting nexin 15.
     
 0.508
SNX4
Sorting nexin 4.
      
 0.499
COMMD9
COMM domain containing 9.
      
 0.489
FCHSD2
FCH and double SH3 domains 2.
    
 
 0.483
PRR13
Uncharacterized protein.
      
 0.468
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.