STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSEDermatan sulfate epimerase. (959 aa)    
Predicted Functional Partners:
B3GALT6
Hexosyltransferase.
      
 0.723
DCN
Decorin; May affect the rate of fibrils formation.
     
 0.604
ARF6
ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.
      
 0.560
UST
Uronyl 2-sulfotransferase.
      
 0.554
CHPF
Hexosyltransferase.
      
 0.491
GSN
Gelsolin.
      
 0.489
GLCE
Glucuronic acid epimerase.
      
 0.468
CHST7
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.467
CHSY1
Hexosyltransferase.
      
 0.461
CHST15
Carbohydrate sulfotransferase 15.
      
 0.457
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.