STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBXN2BUBX domain protein 2B. (349 aa)    
Predicted Functional Partners:
VCP
Valosin containing protein; Belongs to the AAA ATPase family.
   
 0.960
UBXN7
UBX domain-containing protein 7.
    
 
 0.949
ASPSCR1
ASPSCR1 tether for SLC2A4, UBX domain containing.
    
 0.947
VCPIP1
Valosin containing protein interacting protein 1.
    
 
 0.924
UBXN6
UBX domain protein 6.
    
 0.907
UBXN10
UBX domain protein 10.
    
 
 0.873
A0A4W2CGR2
UBX domain-containing protein.
    
 0.867
FAF1
UBX domain-containing protein.
    
 0.867
PLAA
Phospholipase A2 activating protein.
    
 
 0.857
YOD1
YOD1 deubiquitinase.
   
 
 0.856
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.