Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABRAXAS1 | MCPH1 | A0A4W2EU26 | A0A4W2CHQ0 | Abraxas 1, BRCA1 A complex subunit. | Microcephalin 1. | 0.735 |
ABRAXAS1 | MRE11 | A0A4W2EU26 | A0A4W2BZQ2 | Abraxas 1, BRCA1 A complex subunit. | MRE11 homolog, double strand break repair nuclease; Belongs to the MRE11/RAD32 family. | 0.707 |
ABRAXAS1 | NBN | A0A4W2EU26 | A0A4W2CAE8 | Abraxas 1, BRCA1 A complex subunit. | Nibrin; Component of the MRE11-RAD50-NBN (MRN complex) which plays a critical role in the cellular response to DNA damage and the maintenance of chromosome integrity. The complex is involved in double- strand break (DSB) repair, DNA recombination, maintenance of telomere integrity, cell cycle checkpoint control and meiosis. | 0.682 |
ASPM | MCPH1 | A0A4W2C3K3 | A0A4W2CHQ0 | Abnormal spindle microtubule assembly. | Microcephalin 1. | 0.746 |
ASPM | REL | A0A4W2C3K3 | A0A4W2CYQ5 | Abnormal spindle microtubule assembly. | REL proto-oncogene, NF-kB subunit. | 0.724 |
BRCA2 | MCPH1 | A0A4W2BPN3 | A0A4W2CHQ0 | BRCA2 DNA repair associated. | Microcephalin 1. | 0.770 |
BRCA2 | MRE11 | A0A4W2BPN3 | A0A4W2BZQ2 | BRCA2 DNA repair associated. | MRE11 homolog, double strand break repair nuclease; Belongs to the MRE11/RAD32 family. | 0.807 |
BRCA2 | NBN | A0A4W2BPN3 | A0A4W2CAE8 | BRCA2 DNA repair associated. | Nibrin; Component of the MRE11-RAD50-NBN (MRN complex) which plays a critical role in the cellular response to DNA damage and the maintenance of chromosome integrity. The complex is involved in double- strand break (DSB) repair, DNA recombination, maintenance of telomere integrity, cell cycle checkpoint control and meiosis. | 0.695 |
BRCA2 | SLF1 | A0A4W2BPN3 | A0A4W2D295 | BRCA2 DNA repair associated. | SMC5-SMC6 complex localization factor 1. | 0.577 |
BRCA2 | TOPBP1 | A0A4W2BPN3 | A0A4W2F086 | BRCA2 DNA repair associated. | DNA topoisomerase II binding protein 1. | 0.571 |
BRCA2 | WRN | A0A4W2BPN3 | A0A4W2BW89 | BRCA2 DNA repair associated. | WRN RecQ like helicase. | 0.920 |
MCPH1 | ABRAXAS1 | A0A4W2CHQ0 | A0A4W2EU26 | Microcephalin 1. | Abraxas 1, BRCA1 A complex subunit. | 0.735 |
MCPH1 | ASPM | A0A4W2CHQ0 | A0A4W2C3K3 | Microcephalin 1. | Abnormal spindle microtubule assembly. | 0.746 |
MCPH1 | BRCA2 | A0A4W2CHQ0 | A0A4W2BPN3 | Microcephalin 1. | BRCA2 DNA repair associated. | 0.770 |
MCPH1 | MRE11 | A0A4W2CHQ0 | A0A4W2BZQ2 | Microcephalin 1. | MRE11 homolog, double strand break repair nuclease; Belongs to the MRE11/RAD32 family. | 0.744 |
MCPH1 | NBN | A0A4W2CHQ0 | A0A4W2CAE8 | Microcephalin 1. | Nibrin; Component of the MRE11-RAD50-NBN (MRN complex) which plays a critical role in the cellular response to DNA damage and the maintenance of chromosome integrity. The complex is involved in double- strand break (DSB) repair, DNA recombination, maintenance of telomere integrity, cell cycle checkpoint control and meiosis. | 0.738 |
MCPH1 | REL | A0A4W2CHQ0 | A0A4W2CYQ5 | Microcephalin 1. | REL proto-oncogene, NF-kB subunit. | 0.739 |
MCPH1 | SLF1 | A0A4W2CHQ0 | A0A4W2D295 | Microcephalin 1. | SMC5-SMC6 complex localization factor 1. | 0.884 |
MCPH1 | TERF2 | A0A4W2CHQ0 | A0A4W2IIR0 | Microcephalin 1. | Telomeric repeat binding factor 2. | 0.804 |
MCPH1 | TOPBP1 | A0A4W2CHQ0 | A0A4W2F086 | Microcephalin 1. | DNA topoisomerase II binding protein 1. | 0.786 |
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